I have an array of timestamps in the format (HH:MM:SS.mmmmmm) and another array of floating point numbers, each corresponding to a value in the timestamp array.

Can I plot time on the x axis and the numbers on the y-axis using Matplotlib?

I was trying to, but somehow it was only accepting arrays of floats. How can I get it to plot the time? Do I have to modify the format in any way?

You must first convert your timestamps to Python datetime objects (use datetime.strptime). Then use date2num to convert the dates to matplotlib format.

Plot the dates and values using plot_date:

dates = matplotlib.dates.date2num(list_of_datetimes)
matplotlib.pyplot.plot_date(dates, values)

You can also plot the timestamp, value pairs using pyplot.plot (after parsing them from their string representation). (Tested with matplotlib versions 1.2.0 and 1.3.1.)

Example:

import datetime
import random
import matplotlib.pyplot as plt

# make up some data
x = [datetime.datetime.now() + datetime.timedelta(hours=i) for i in range(12)]
y = [i+random.gauss(0,1) for i,_ in enumerate(x)]

# plot
plt.plot(x,y)
# beautify the x-labels
plt.gcf().autofmt_xdate()

plt.show()

Resulting image:

Here’s the same as a scatter plot:

import datetime
import random
import matplotlib.pyplot as plt

# make up some data
x = [datetime.datetime.now() + datetime.timedelta(hours=i) for i in range(12)]
y = [i+random.gauss(0,1) for i,_ in enumerate(x)]

# plot
plt.scatter(x,y)
# beautify the x-labels
plt.gcf().autofmt_xdate()

plt.show()

Produces an image similar to this:

7 years later and this code has helped me. However, my times still were not showing up correctly.

Using Matplotlib 2.0.0 and I had to add the following bit of code from Editing the date formatting of x-axis tick labels in matplotlib by Paul H.

import matplotlib.dates as mdates
myFmt = mdates.DateFormatter('%d')
ax.xaxis.set_major_formatter(myFmt)

I changed the format to (%H:%M) and the time displayed correctly.

All thanks to the community.

I had trouble with this using matplotlib version: 2.0.2. Running the example from above I got a centered stacked set of bubbles.

I “fixed” the problem by adding another line:

plt.plot([],[])

The entire code snippet becomes:

import datetime
import random
import matplotlib.pyplot as plt
import matplotlib.dates as mdates


# make up some data
x = [datetime.datetime.now() + datetime.timedelta(minutes=i) for i in range(12)]
y = [i+random.gauss(0,1) for i,_ in enumerate(x)]

# plot
plt.plot([],[])
plt.scatter(x,y)

# beautify the x-labels
plt.gcf().autofmt_xdate()
myFmt = mdates.DateFormatter('%H:%M')
plt.gca().xaxis.set_major_formatter(myFmt)

plt.show()
plt.close()

This produces an image with the bubbles distributed as desired.